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contest_dataset [2012/02/22 15:01] dschroeder [Challenges] |
contest_dataset [2012/02/22 15:03] dschroeder [Data Description] |
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| - | ===== Dataset 2: Human genomes ===== | + | ===== Dataset 2: KPGP-38 Human Genomes ===== |
| Both bioinformatics and medical informatics professionals are challenged with massive data generated by genome sequencing and complex data from the electronic medical records. How do we leverage these data to improve patient care? The second track of CAMDA will address some of the issues. The purpose of this track is exploratory. We see it more of a collaborative effort from the community to define the problems, rather than a competition among groups for the best answer. Thus, tasks in this track are less defined, and regular conference calls will be held for discussions. | Both bioinformatics and medical informatics professionals are challenged with massive data generated by genome sequencing and complex data from the electronic medical records. How do we leverage these data to improve patient care? The second track of CAMDA will address some of the issues. The purpose of this track is exploratory. We see it more of a collaborative effort from the community to define the problems, rather than a competition among groups for the best answer. Thus, tasks in this track are less defined, and regular conference calls will be held for discussions. | ||
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| ==== Data Description ==== | ==== Data Description ==== | ||
| - | 50 Human genomes sequenced on Illumina HiSeq 2000 platform with 30x to 40x coverage. | + | 38 Human genomes sequenced on Illumina HiSeq 2000 platform with 30x to 40x coverage. |
| Human subjects are part of the Korean Personal Genome Project, which is part of the international Personal Genome Project (PGP). Limited medical record data is available for the subjects. | Human subjects are part of the Korean Personal Genome Project, which is part of the international Personal Genome Project (PGP). Limited medical record data is available for the subjects. | ||
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