The scientific program includes Keynotes by leading researchers in the field and selected presentations of contest dataset analyses.

camda2012programschedule.pdf

camda2012abstracts_updated.pdf

The two-day meeting also features a poster session and opportunities for informal discussions during a social dinner.

The conference closes on Saturday in time for delegates to join to the evening reception of ISMB.
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“Dissecting cell-lineage specific signals in functional genomics data compendia”

Olga Troyanskaya is an Associate Professor in the Lewis-Sigler Institute for Integrative Genomics and the Department of Computer Science at Princeton University, USA. Her work bridges computer science and molecular biology in an effort to develop better methods for analysis of diverse genomic data with the goal of understanding and modeling protein function and interactions in biological pathways. Her group includes computational and experimental aspects, and tackles diverse questions including developing integrative technologies for pathway prediction and the study of biological networks in complex human disease. She received her Ph.D. from Stanford University and is a recipient of the Sloan Research Fellowship, the NSF CAREER award, the Howard Wentz faculty award from Princeton University, and the Blavatnik Finalist Award from the NYAS. She has also been honored as one of the top young technology innovators by the MIT Technology Review and is the 2011 recipient of the Overton Prize in computational biology.

“Mining the Toxicogenomic Gold: A Decade of Toxicogenomic Research Offers Unprecedented Opportunities”

Director of Center for Bioinformatics – NCTR/FDA

7:30 - 8:15 Registration (Long Beach Convention Center, Promenade Lobby)

8:15 - 8:30 Welcome (Hyatt Hotel - Regency Ballroom D)

8:30 - 9:30 Keynote: “Dissecting cell-lineage specific signals in functional genomics data compendia” - Dr. Olga Troyanskaya, Associate Professor in the Lewis-Sigler Institute for Integrative Genomics and the Department of Computer Science at Princeton University, USA

9:30 - 10:30 Population Genetic Inference for a Whole Genome Korean Sample. Zhan Ye, Daniel A Vasco, Steven Schrodi and Simon Lin

10:30 - 11:00 Coffee Break

11:00 - 12:00 Rare Haplotypes in the Korean Population. Sepp Hochreiter, Günter Klambauer, Gundula Povysil and Djork-Arné Clevert

12:00 - 13:30 Lunch – Check ticket for location.

13:30 - 14:30 Characterization and Analysis of Korean Genomes. Zhan Ye, Daniel A Vasco, Steven Schrodi and Simon Lin

14:30 - 15:30 CAGI-The Critical Assessment of Genome Interpretation, a community experiment to evaluate phenotype prediction. Steven Brenner, Susanna Repo and John Moult

15:30 - 16:00 Coffee Break

16:00 - 17:00 Clinical Genomics-Genetic Prediction of Pharmacological Response to Lercanidipine and Risk of Hypertension. Zhan Ye, Daniel A Vasco, Steven Schrodi and Simon Lin

17:00 - 18:00 A heuristic framework for variant calling and de novo mutation detection in trios. Yongzhuang Liu and Min He

7:30 - 8:15 Registration (Long Beach Convention Center, Promenade Lobby)

8:15 - 8:30 Session Overview (Hyatt Hotel - Regency Ballroom D)

8:30 - 9:30 Keynote: “Mining the Toxicogenomic Gold: A Decade of Toxicogenomic Research Offers Unprecedented Opportunities” – Dr. Weida Tong, Director of Center for Bioinformatics – NCTR/FDA, USA

9:30 - 10:30 The impact of collapsing data on microarray analysis and DILI prediction. Jean-Francois Pessiot, Pui Shan Wong, Toru Maruyama, Ryoko Morioka, Sachiyo Aburatani, Michihiro Tanaka and Wataru Fujibuchi

10:30 - 11:00 Coffee Break

11:00 - 12:00 Exploiting the Japanese Toxicogenomics Project for Predictive Modelling of Drug Toxicity. Djork-Arné Clevert, Martin Heusel, Andreas Mitterecker, Willem Talloen, Hinrich Göhlmann, Jörg Wegner, Andreas Mayr, Günter Klambauer and Sepp Hochreiter

12:00 - 13:00 Lunch – Check ticket for location.

13:00 - 14:00 Using Linear Models to bootstrap Non-Linear models for prediction of Drug Induced Liver Injury. Mike Bowles, Ron Shigeta and David Dehghan

14:00 - 15:00 Pharmacogenomics in the Pocket of Every Patient? - A Prototype Card with Quick Response (QR) Code. Matthias Samwald, Zhan Ye, Daniel A Vasco, Steven Schrodi, Murray Brilliant and Simon Lin

15:00 - 15:30 Open Discussion

15:30 - 16:00 Coffee Break

16:00 - 17:00 CAMDA Award/Conference Closes

We look forward to seeing you!